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BIMM 127: Marine Microbiology Laboratory
4.00 Credits
University of California-San Diego
Techniques and theory in environmental microbiology. Students perform experiments concerning a) enrichment, enumeration, and identification and b) metabolic and physiochemical adaptations, along with an independent project. Graduate students submit an additional report and take a modified final exam. Prerequisites: upper-division standing. Attendance at the first lecture/lab is required. Nonattendance will result in the student’s being dropped from the course roster.
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BIMM 127 - Marine Microbiology Laboratory
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BIMM 130: Microbial Physiology
4.00 Credits
University of California-San Diego
Prokaryotic microbial physiology will be discussed primarily from a biochemical standpoint with emphasis on mechanism. Topics will vary from year to year but will include the following themes: Central metabolism, bioenergetics, biosynthesis, regulation, differentiation, prokaryotic structure-function relationships. Prerequisites: BIBC 100 or BIBC 102 or equivalent.
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BIMM 130 - Microbial Physiology
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BIMM 132: Molecular Biology of Human Retroviruses
4.00 Credits
University of California-San Diego
Replication cycle and gene regulation of HIV. Molecular approaches to therapy and vaccines. Three hours of lecture. Prerequisites: BIMM 100.
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BIMM 132 - Molecular Biology of Human Retroviruses
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BIMM 134: Biology of Cancer
4.00 Credits
University of California-San Diego
This course covers basic processes of transformation and tumor formation in a two-part format. The first section is focused on molecular and cellular mechanisms of carcinogenesis. The second section discusses tumor pathology and metastasis. Open to upper-division students only. Prerequisites: BICD 110 and BIMM 100.
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BIMM 134 - Biology of Cancer
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BIMM 162: 3D Electron Microscopy of Macromolecules
4.00 Credits
University of California-San Diego
Biological macromolecules and supramolecular complexes, organelles, and small cells are being examined in three-dimensions by modern electron cryomicroscopy and image reconstruction techniques. The basic principles of transmission electron microscopy and 3D image reconstruction are discussed. Prerequisites: Chem 114A or BIBC 100 or BIBC 110 and Physics 1C or 2C or 2D; upper-division standing.
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BIMM 162 - 3D Electron Microscopy of Macromolecules
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BIMM 164: Structural Biology of Viruses
4.00 Credits
University of California-San Diego
An introduction to virus structures, how they are determined, and how they facilitate the various stages of the viral life cycle from host recognition and entry to replication, assembly, release, and transmission to uninfected host cells. Prerequisites: BIBC 100 or Chem 114A; upper-division standing.
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BIMM 164 - Structural Biology of Viruses
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BIMM 166: Environmental and Molecular Toxicology
4.00 Credits
University of California-San Diego
(Cross-listed with Chem 166; conjoined with BGGN 256, BIOM 266, and Chem 266.) This course will investigate approaches to study the impact of environmental toxicants on human health. Other modern approaches that are being implemented to detect and remediate environmental toxicants will also be examined. Graduate students will be required to complete an additional paper and/or exam beyond that expected of undergraduate students. Prerequisites: upper-division standing for BIMM 166 and Chem 166; graduate standing for BGGN 256, BIOM 266, and Chem 266.
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BIMM 166 - Environmental and Molecular Toxicology
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BIMM 171: Genomics Research Initiative
1.00 Credits
University of California-San Diego
This class will examine the theoretical and practical basis of modern genomics research. Students will learn the theoretical basis of genomics and tools used for the sequencing and annotation of genomic DNA, and computational and molecular methods for the study of evolution. Prerequisites: departmental approval required (department will preauthorize students to enroll). Restricted to students participating in the National Genomics Research Initiative Program.
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BIMM 171 - Genomics Research Initiative
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BIMM 171A: Genomics Research Initiative Laboratory I
4.00 Credits
University of California-San Diego
Students will isolate bacterial viruses or other organisms from the environment and characterize them by methods including electron microscopy and nucleic acid analysis. The genomic DNA will be purified, and sent for sequencing. Prerequisites: departmental approval required. Restricted to students participating in the National Genomics Research Initiative Program.
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BIMM 171A - Genomics Research Initiative Laboratory I
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BIMM 171B: Genomics Research Initiative Laboratory II
4.00 Credits
University of California-San Diego
Students will characterize the genomic sequence of the organisms isolated in BIMM 171A and use molecular and computational tools to resolve ambiguities and close gaps. They will then annotate the DNA sequence to identify protein and RNA coding regions. Prerequisites: BIMM 171 and BIMM 171A.
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BIMM 171B - Genomics Research Initiative Laboratory II
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