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03 402: Undergraduate Colloquium for Seniors
1.00 - 3.00 Credits
Carnegie Mellon University
No course description available.
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03 402 - Undergraduate Colloquium for Seniors
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03 410: Microbiology Readings
12.00 Credits
Carnegie Mellon University
Special Topics in Biological Sciences.
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03 410 - Microbiology Readings
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03 411: Topics in Research
1.00 - 2.00 Credits
Carnegie Mellon University
During the year students attend and submit brief summaries of weekly seminars given by outside speakers or members of the Biology Department on current research topics in modern biology; some seminars outside of the department may be substituted.
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03 411 - Topics in Research
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03 412: Topics in Research
1.00 - 2.00 Credits
Carnegie Mellon University
During the year students attend and submit brief summaries of weekly seminars given by outside speakers or members of the Biology Department on current research topics in modern biology. Some seminars outside of the department may be substituted.
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03 412 - Topics in Research
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03 439: Introduction to Biophysics
9.00 Credits
Carnegie Mellon University
Description: This intermediate level course is primarily offered to Physics and Biology undergrads (junior/senior) and provides a modern view of molecular and cellular biology as seen from the perspective of physics, and quanti?ed through the analytical tools of physics. This course will not review experimental biophysical techniques (which are covered, e.g., in 03-871). Rather, physicists will learn what sets ?bio? apart from the remainder of the Physics world and how the apparent dilemma that the existence of life represents to classical thermodynamics is reconciled. They also will learn the nomenclature used in molecular biology. In turn, biologists will obtain (a glimpse of) what quantitative tools can achieve beyond the mere collecting and archiving of facts in a universe of observations: By devising models, non-obvious quantitative predictions are derived which can be experimentally tested and may lead to threads that connect vastly different, apparently unrelated phenomena. One major goal is then to merge the two areas, physics and biology, in a uni?ed perspective.
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03 439 - Introduction to Biophysics
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03 442: Molecular Biology
9.00 Credits
Carnegie Mellon University
The structure and expression of eukaryotic genes are discussed, focusing on model systems from a variety of organisms including yeast, flies, worms, mice, humans, and plants. Topics discussed include (1) genomics,proteomics, and functional proteomics and (2) control of gene expression at the level of transcription of mRNA from DNA, splicing of pre-mRNA, export of spliced mRNA from the nucleus to the cytoplasm, and translation of mRNA.
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03 442 - Molecular Biology
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03 445: Undergraduate Research
1.00 - 18.00 Credits
Carnegie Mellon University
Students may investigate research problems under the supervision of members of the faculty. Permission of a faculty advisor required.
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03 445 - Undergraduate Research
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03 511: Computational Molecular Biology and Genomics
9.00 Credits
Carnegie Mellon University
An advanced introduction to computational molecular biology, using an applied algorithms approach. The first part of the course will cover established algorithmic methods, including pairwise sequence alignment and dynamic programming, multiple sequence alignment, fast database search heuristics, hidden Markov models for molecular motifs and phylogeny reconstruction. The second part of the course will explore emerging computational problems driven by the newest genomic research. Course work includes four to six problem sets, one midterm and final exam.
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03 511 - Computational Molecular Biology and Genomics
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03 512: Computational Methods for Biological Modeling and Simulation
9.00 Credits
Carnegie Mellon University
This course covers a variety of computational methods important for modeling and simulation of biological systems. It is intended for graduates and advanced undergraduates with either biological or computational backgrounds who are interested in developing computer models and simulations of biological systems. The course will emphasize practical algorithms and algorithm design methods drawn from various disciplines of computer science and applied mathematics that are useful in biological applications. The general topics covered will be models for optimization problems, simulation and sampling, and parameter tuning. Course work will include problems sets with significant programming components and independent or group final projects.
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03 512 - Computational Methods for Biological Modeling and Simulation
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03 534: Biological Imaging and Fluorescence Spectroscopy
9.00 Credits
Carnegie Mellon University
This course covers principles and applications of optical methods in the study of structure and function in biological systems. Topics to be covered include: absorption and fluorescence spectroscopy; interaction of light with biological molecules, cells, and systems; design of fluorescent probes and optical biosensor molecules; genetically expressible optical probes; photochemistry; optics and image formation; transmitted-light and fluorescence microscope systems; laser-based systems; scanning microscopes; electronic detectors and cameras: image processing; multi-mode imaging systems; microscopy of living cells; and the optical detection of membrane potential, molecular assembly, transcription, enzyme activity, and the action of molecular motors. This course is particularly aimed at students in science and engineering interested in gaining in-depth knowledge of modern light microscopy.
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03 534 - Biological Imaging and Fluorescence Spectroscopy
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